Transcript: ENST00000233838.4 GGCX-001

Description

gamma-glutamyl carboxylase [Source:HGNC Symbol;Acc:4247]

Gene Synonyms

GC, VKCFD1

Location

Chromosome 2: 85,771,846-85,788,632 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 19 domains and features, is associated with 8105 variant alleles and maps to 927 oligo probes.

Gene

This transcript is a product of gene ENSG00000115486.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000233838.4	GGCX-001	7569	758aa	ENSP00000233838.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1978	P38435	NM_000821.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430215.3	GGCX-007	2314	701aa	ENSP00000408045.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46353	P38435	NM_001142269.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423570.1	GGCX-002	1339	123aa	ENSP00000389426.1	Nonsense mediated decay		F8WDU9	-	-
ENST00000421496.1	GGCX-009	540	66aa	ENSP00000400384.1	Nonsense mediated decay		F8WCF0	-	-
ENST00000428479.3	GGCX-005	533	73aa	ENSP00000390748.3	Nonsense mediated decay		F8WB98	-	-
ENST00000473665.1	GGCX-010	869	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482662.1	GGCX-012	720	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496962.1	GGCX-003	684	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481541.1	GGCX-004	600	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465637.1	GGCX-006	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 7,569 bps, Translation length: 758 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P38435

CCDS

This transcript is a member of the Human CCDS set: CCDS1978

Version

ENST00000233838.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000252490 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000233838.4 GGCX-001

Summary