Transcript: ENST00000238714.3 PAPOLG-001

Description

poly(A) polymerase gamma [Source:HGNC Symbol;Acc:14982]

Gene Synonyms

FLJ12972, PAP2, PAPG

Location

About this transcript

This transcript has 22 exons, is annotated with 14 domains and features, is associated with 20109 variant alleles and maps to 760 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000412217.1	PAPOLG-005	6074	382aa	ENSP00000405570.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q59G05	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000238714.3	PAPOLG-001	4263	736aa	ENSP00000238714.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1863	F8WAT4 Q2TAI9 Q53T17 Q53T81 Q9BWT3 Q9H968	NM_022894.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000414060.1	PAPOLG-003	3511	234aa	ENSP00000405599.1	Nonsense mediated decay		F8WAT4	-	-
ENST00000453839.1	PAPOLG-004	3324	168aa	ENSP00000414070.1	Nonsense mediated decay		H7C3W0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000483370.1	PAPOLG-008	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496283.1	PAPOLG-002	4193	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470208.1	PAPOLG-007	686	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 4,263 bps, Translation length: 736 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BWT3

CCDS

This transcript is a member of the Human CCDS set: CCDS1863

Version

ENST00000238714.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000251577 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.