Transcript: ENST00000263642.2 IFIH1-001

Description

interferon induced with helicase C domain 1 [Source:HGNC Symbol;Acc:18873]

Gene Synonyms

Hlcd, IDDM19, MDA-5, MDA5, RH116, RLR-2

Location

About this transcript

This transcript has 16 exons, is annotated with 26 domains and features, is associated with 22788 variant alleles and maps to 555 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263642.2	IFIH1-001	3595	1025aa	ENSP00000263642.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2217	Q53TB6 Q53TP4 Q9BYX4	NM_022168.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000421365.2	IFIH1-002	1617	221aa	ENSP00000408450.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BYX4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000464129.1	IFIH1-003	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 3,595 bps, Translation length: 1,025 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BYX4

CCDS

This transcript is a member of the Human CCDS set: CCDS2217

Version

ENST00000263642.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000255078 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.