Transcript: ENST00000535453.1 APC2-004

Description

adenomatosis polyposis coli 2 [Source:HGNC Symbol;Acc:24036]

Gene Synonyms

APCL

Location

Chromosome 19: 1,451,288-1,473,237 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 57 domains and features, is associated with 15019 variant alleles and maps to 600 oligo probes.

Gene

This transcript is a product of gene ENSG00000115266.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000535453.1	APC2-004	11650	2303aa	ENSP00000442954.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12068	K7ELQ3 K7EN62 O95996	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000233607.2	APC2-201	10151	2303aa	ENSP00000233607.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12068	K7ELQ3 K7EN62 O95996	NM_005883.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000238483.4	APC2-202	9329	2029aa	ENSP00000238483.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MDS5 K7ELQ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590469.1	APC2-001	2316	702aa	ENSP00000467073.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELQ3 K7EN62 O95996	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000590877.1	APC2-007	609	138aa	ENSP00000466173.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELQ3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000587869.1	APC2-005	581	174aa	ENSP00000466803.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELQ3 K7EN62	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000587149.1	APC2-008	555	138aa	ENSP00000468199.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELQ3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000593146.1	APC2-003	2897	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 11,650 bps, Translation length: 2,303 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95996

CCDS

This transcript is a member of the Human CCDS set: CCDS12068

Version

ENST00000535453.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000449539 (version 2)

Annotation Attributes

retained intron first [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000535453.1 APC2-004

Summary