Transcript: ENST00000380809.3 DNAJC27-002

Description

DnaJ (Hsp40) homolog, subfamily C, member 27 [Source:HGNC Symbol;Acc:30290]

Gene Synonyms

RABJS, RBJ, RabJS

Location

About this transcript

This transcript has 9 exons, is annotated with 10 domains and features, is associated with 10376 variant alleles and maps to 440 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264711.2	DNAJC27-001	4992	273aa	ENSP00000264711.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1716	F5GY94 Q53T06 Q53T53 Q9NZQ0	NM_016544.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534855.1	DNAJC27-201	1415	202aa	ENSP00000440086.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GY94 Q53T53	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380809.3	DNAJC27-002	1378	90aa	ENSP00000370187.3	Nonsense mediated decay		Q9NZQ0	-	-
ENST00000468467.1	DNAJC27-003	561	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494239.1	DNAJC27-005	547	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468750.1	DNAJC27-004	463	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492985.1	DNAJC27-007	485	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 4, Transcript length: 1,378 bps, Translation length: 90 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NZQ0

Version

ENST00000380809.3

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000324633 (version 1)