Transcript: ENST00000263707.5 TFCP2L1-001

Description

transcription factor CP2-like 1 [Source:HGNC Symbol;Acc:17925]

Gene Synonyms

CRTR1, LBP-9, LBP9

Location

About this transcript

This transcript has 15 exons, is annotated with 5 domains and features, is associated with 31003 variant alleles and maps to 728 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263707.5	TFCP2L1-001	9292	479aa	ENSP00000263707.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2134	Q53RS7 Q5JV87 Q9NZI6	NM_014553.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464621.1	TFCP2L1-002	603	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 9,292 bps, Translation length: 479 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NZI6

CCDS

This transcript is a member of the Human CCDS set: CCDS2134

Version

ENST00000263707.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000338539 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.