Transcript: ENST00000425141.1 SLC4A3-004

Description

solute carrier family 4 (anion exchanger), member 3 [Source:HGNC Symbol;Acc:11029]

Gene Synonyms

AE3, SLC2C

Location

Chromosome 2: 220,492,349-220,506,450 forward strand.

About this transcript

This transcript has 23 exons, is annotated with 17 domains and features, is associated with 7675 variant alleles and maps to 758 oligo probes.

Gene

This transcript is a product of gene ENSG00000114923.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000358055.3	SLC4A3-009	4454	1232aa	ENSP00000350756.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2445	P48751	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373762.3	SLC4A3-201	4300	1259aa	ENSP00000362867.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2446	P48751	NM_005070.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000273063.6	SLC4A3-001	4246	1259aa	ENSP00000273063.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2446	P48751	NM_201574.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373760.2	SLC4A3-010	4134	1232aa	ENSP00000362865.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2445	P48751	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000317151.3	SLC4A3-002	4069	1232aa	ENSP00000314006.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2445	P48751	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413743.1	SLC4A3-008	792	227aa	ENSP00000414722.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PCP1 Q12835	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000425141.1	SLC4A3-004	3936	518aa	ENSP00000396863.1	Nonsense mediated decay		F8WD49	-	-
ENST00000416910.1	SLC4A3-011	1862	207aa	ENSP00000403160.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000444906.1	SLC4A3-005	547	74aa	ENSP00000398628.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000497589.1	SLC4A3-003	835	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 10, Transcript length: 3,936 bps, Translation length: 518 residues

Version

ENST00000425141.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000131430 (version 3)

Favourite species

All species

Recent locations

Transcript: ENST00000425141.1 SLC4A3-004

Summary