Transcript: ENST00000493199.1 NEK4-006

Description

NIMA-related kinase 4 [Source:HGNC Symbol;Acc:11399]

Gene Synonyms

NRK2, STK2, pp12301

Location

Chromosome 3: 52,777,244-52,780,130 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1342 variant alleles and maps to 118 oligo probes.

Gene

This transcript is a product of gene ENSG00000114904.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000233027.5	NEK4-001	3722	841aa	ENSP00000233027.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2863	P51957	NM_003157.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000383721.4	NEK4-002	2576	781aa	ENSP00000373227.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P51957	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535191.1	NEK4-201	2553	752aa	ENSP00000437703.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54593	E7EX48 P51957	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000461689.1	NEK4-003	2276	722aa	ENSP00000419666.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EX48	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000487068.1	NEK4-005	631	142aa	ENSP00000420231.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000496822.1	NEK4-004	582	37aa	ENSP00000417119.1	Nonsense mediated decay		F8WAX1	-	-
ENST00000493199.1	NEK4-006	355	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 355 bps,

Version

ENST00000493199.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000352573 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000493199.1 NEK4-006

Summary