Transcript: ENST00000497817.1 WNT5A-008

Description

wingless-type MMTV integration site family, member 5A [Source:HGNC Symbol;Acc:12784]

Gene Synonyms

hWNT5A

Location

About this transcript

This transcript has 2 exons, is associated with 874 variant alleles and maps to 123 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000474267.1	WNT5A-001	6042	380aa	ENSP00000417310.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46850	P41221	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000264634.4	WNT5A-201	5837	380aa	ENSP00000264634.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46850	P41221	NM_003392.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000497027.1	WNT5A-005	1299	365aa	ENSP00000420104.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58835	P41221	NM_001256105.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000482079.1	WNT5A-009	959	214aa	ENSP00000418184.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J8I8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000493406.1	WNT5A-007	521	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497817.1	WNT5A-008	661	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 661 bps,

Version

ENST00000497817.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000350848 (version 1)