Transcript: ENST00000231198.7 THG1L-001

Description

tRNA-histidine guanylyltransferase 1-like (S. cerevisiae) [Source:HGNC Symbol;Acc:26053]

Gene Synonyms

FLJ11601, FLJ20546, ICF45, IHG-1

Location

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 4949 variant alleles and maps to 465 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000231198.7	THG1L-001	3107	298aa	ENSP00000231198.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4341	Q9H8R6 Q9NWX6	NM_017872.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521655.1	THG1L-002	919	124aa	ENSP00000428387.1	Nonsense mediated decay		E5RIQ8	-	-
ENST00000523575.1	THG1L-005	576	34aa	ENSP00000431090.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 3,107 bps, Translation length: 298 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NWX6

CCDS

This transcript is a member of the Human CCDS set: CCDS4341

Version

ENST00000231198.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000252579 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.