Transcript: ENST00000477442.2 SRSF3-002

Description

serine/arginine-rich splicing factor 3 [Source:HGNC Symbol;Acc:10785]

Gene Synonyms

SFRS3, SRP20, SRp20

Location

About this transcript

This transcript has 7 exons, is annotated with 7 domains and features, is associated with 4929 variant alleles and maps to 474 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373715.6	SRSF3-001	4222	164aa	ENSP00000362820.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4823	B2R6F3 P84103	NM_003017.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000339436.7	SRSF3-201	1518	124aa	ENSP00000344762.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E241	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000477442.2	SRSF3-002	1095	124aa	ENSP00000436036.1	Nonsense mediated decay		B4E241	-	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 1,095 bps, Translation length: 124 residues

Version

ENST00000477442.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000040348 (version 4)