Transcript: ENST00000229281.5 C12orf57-001

Description

chromosome 12 open reading frame 57 [Source:HGNC Symbol;Acc:29521]

Gene Synonyms

C10, GRCC10, TEMTYS

Location

Chromosome 12: 7,053,186-7,055,165 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 1618 variant alleles and maps to 211 oligo probes.

Gene

This transcript is a product of gene ENSG00000111678.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000544681.1	C12orf57-004	980	103aa	ENSP00000475422.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQ07	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537087.1	C12orf57-006	662	97aa	ENSP00000440937.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXW5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000229281.5	C12orf57-001	560	126aa	ENSP00000229281.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8571	Q99622 U3KQ85	NM_138425.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545581.1	C12orf57-003	556	126aa	ENSP00000440602.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q99622 U3KQ85	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000540506.2	C12orf57-005	551	91aa	ENSP00000475635.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQ85	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542222.1	C12orf57-007	640	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000538392.1	C12orf57-002	979	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 560 bps, Translation length: 126 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99622

CCDS

This transcript is a member of the Human CCDS set: CCDS8571

Version

ENST00000229281.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000401959 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000229281.5 C12orf57-001

Summary