Transcript: ENST00000542868.1 GNB3-004

Description

guanine nucleotide binding protein (G protein), beta polypeptide 3 [Source:HGNC Symbol;Acc:4400]

Location

Chromosome 12: 6,950,205-6,952,165 forward strand.

About this transcript

This transcript has 2 exons, is associated with 985 variant alleles and maps to 362 oligo probes.

Gene

This transcript is a product of gene ENSG00000111664.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000229264.3	GNB3-002	1923	340aa	ENSP00000229264.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8564	F1T0G5 F5H100 P16520 Q8IWZ9	NM_002075.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435982.2	GNB3-005	1110	339aa	ENSP00000414734.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PCP0 F5H8J8 Q8IWZ9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541978.1	GNB3-011	962	232aa	ENSP00000439753.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H100	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000537035.1	GNB3-009	796	264aa	ENSP00000445967.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0S8 Q8IWZ9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000541257.1	GNB3-007	761	232aa	ENSP00000442002.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H8J8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000539127.1	GNB3-008	590	36aa	ENSP00000444325.1	Nonsense mediated decay		F5GZN8	-	-
ENST00000540458.1	GNB3-003	2869	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000542751.1	GNB3-010	997	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000542868.1	GNB3-004	616	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 616 bps,

Version

ENST00000542868.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000400012 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000542868.1 GNB3-004

Summary