Transcript: ENST00000544619.1 CAND1-003

Description

cullin-associated and neddylation-dissociated 1 [Source:HGNC Symbol;Acc:30688]

Gene Synonyms

DKFZp434M1414, KIAA0829, TIP120, TIP120A

Location

Chromosome 12: 67,692,752-67,708,388 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 8 domains and features, is associated with 6422 variant alleles and maps to 550 oligo probes.

Gene

This transcript is a product of gene ENSG00000111530.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000545606.1	CAND1-001	11251	1230aa	ENSP00000442318.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8977	B3KMG3 F5H6I6 Q86VP6	NM_018448.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544619.1	CAND1-003	4091	770aa	ENSP00000444089.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KMG3 Q86VP6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000540525.1	CAND1-007	527	54aa	ENSP00000437594.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H6I6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000540319.1	CAND1-002	2786	442aa	ENSP00000445794.1	Nonsense mediated decay		H0YH27	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000539109.1	CAND1-009	433	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000539434.1	CAND1-006	772	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000541058.1	CAND1-005	663	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000535146.1	CAND1-008	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 4,091 bps, Translation length: 770 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86VP6

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000544619.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000402112 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000544619.1 CAND1-003

Summary