Transcript: ENST00000552789.1 LTA4H-003

Description

leukotriene A4 hydrolase [Source:HGNC Symbol;Acc:6710]

Gene Synonyms

LTA4

Location

Chromosome 12: 96,394,608-96,437,255 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 14 domains and features, is associated with 16639 variant alleles and maps to 511 oligo probes.

Gene

This transcript is a product of gene ENSG00000111144.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000228740.2	LTA4H-001	2139	611aa	ENSP00000228740.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9059	P09960 Q49AK0	NM_000895.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552789.1	LTA4H-003	2025	587aa	ENSP00000449958.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58267	P09960 Q49AK0	NM_001256643.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413268.2	LTA4H-002	1908	508aa	ENSP00000395051.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58266	P09960	NM_001256644.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548852.1	LTA4H-004	1810	132aa	ENSP00000449340.1	Nonsense mediated decay		B4DEH5	-	-
ENST00000548375.1	LTA4H-010	639	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553041.1	LTA4H-007	6109	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000537111.2	LTA4H-009	1881	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000547982.1	LTA4H-008	986	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000552091.1	LTA4H-012	595	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000547393.1	LTA4H-011	543	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 2,025 bps, Translation length: 587 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P09960

CCDS

This transcript is a member of the Human CCDS set: CCDS58267

Version

ENST00000552789.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs2228061, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HAPMAP-LWK, CSHL-HAPMAP:HAPMAP-MKK, CSHL-HAPMAP:HAPMAP-ASW, CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HAPMAP-MEX, CSHL-HAPMAP:HAPMAP-CHD.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000408657 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000552789.1 LTA4H-003

Summary