Transcript: ENST00000226067.5 HLF-001

Description

hepatic leukemia factor [Source:HGNC Symbol;Acc:4977]

Gene Synonyms

MGC33822

Location

Chromosome 17: 53,342,373-53,402,426 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 12 domains and features, is associated with 25018 variant alleles and maps to 629 oligo probes.

Gene

This transcript is a product of gene ENSG00000108924.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000226067.5	HLF-001	5547	295aa	ENSP00000226067.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11585	A8K1X8 Q16534 Q6FHS9	NM_002126.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000575345.1	HLF-005	3589	210aa	ENSP00000460572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8K1X8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000573945.1	HLF-003	2977	210aa	ENSP00000460296.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8K1X8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430986.2	HLF-002	1385	210aa	ENSP00000402496.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8K1X8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000572002.1	HLF-011	1251	236aa	ENSP00000461455.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L4R4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000570962.1	HLF-004	1310	77aa	ENSP00000460265.1	Nonsense mediated decay		I3L386	-	-
ENST00000575307.1	HLF-010	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000575868.2	HLF-009	561	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000573422.1	HLF-008	493	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000573020.1	HLF-006	414	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000572234.2	HLF-007	298	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 5,547 bps, Translation length: 295 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16534

CCDS

This transcript is a member of the Human CCDS set: CCDS11585

Version

ENST00000226067.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000439185 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000226067.5 HLF-001

Summary