Transcript: ENST00000586801.1 CNTNAP1-004

Description

contactin associated protein 1 [Source:HGNC Symbol;Acc:8011]

Gene Synonyms

CASPR, CNTNAP, Caspr, NRXN4, P190, p190

Location

About this transcript

This transcript has 2 exons, is associated with 695 variant alleles and maps to 79 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264638.4	CNTNAP1-001	5276	1384aa	ENSP00000264638.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11436	P78357	NM_003632.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591662.1	CNTNAP1-002	4499	740aa	ENSP00000466571.1	Nonsense mediated decay		K7EMM9	-	-
ENST00000586801.1	CNTNAP1-004	838	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000585534.1	CNTNAP1-003	613	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 838 bps,

Version

ENST00000586801.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000452344 (version 1)