Transcript: ENST00000225873.4 PEX12-001

Description

peroxisomal biogenesis factor 12 [Source:HGNC Symbol;Acc:8854]

Gene Synonyms

PAF-3, PAF3, PBD3A

Location

About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 2024 variant alleles and maps to 349 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000225873.4	PEX12-001	2675	359aa	ENSP00000225873.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11296	K7ELY8 O00623	NM_000286.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000585380.1	PEX12-003	897	221aa	ENSP00000466280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELY8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000586663.1	PEX12-002	1607	358aa	ENSP00000466894.1	Non stop decay		K7ELY8	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,675 bps, Translation length: 359 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00623

CCDS

This transcript is a member of the Human CCDS set: CCDS11296

Version

ENST00000225873.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000256489 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.