Transcript: ENST00000397786.2 MED13-001

Description

mediator complex subunit 13 [Source:HGNC Symbol;Acc:22474]

Gene Synonyms

ARC250, DRIP250, HSPC221, KIAA0593, THRAP1, TRAP240

Location

About this transcript

This transcript has 30 exons, is annotated with 15 domains and features, is associated with 60554 variant alleles and maps to 1106 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397786.2	MED13-001	10465	2174aa	ENSP00000380888.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42366	Q9UHV7	NM_005121.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000583958.1	MED13-003	1068	327aa	ENSP00000464131.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9P0Q5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000580896.1	MED13-004	251	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000581994.1	MED13-002	2213	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000578132.1	MED13-005	751	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000582786.1	MED13-006	341	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 30, Coding exons: 30, Transcript length: 10,465 bps, Translation length: 2,174 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UHV7

CCDS

This transcript is a member of the Human CCDS set: CCDS42366

Version

ENST00000397786.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000445461 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.