Transcript: ENST00000371418.4 LGI1-001

Description

leucine-rich, glioma inactivated 1 [Source:HGNC Symbol;Acc:6572]

Gene Synonyms

ADLTE, ADPAEF, ADPEAF, EPITEMPIN, EPT, ETL1, IB1099

Location

About this transcript

This transcript has 8 exons, is annotated with 26 domains and features, is associated with 16253 variant alleles and maps to 408 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371418.4	LGI1-001	2290	557aa	ENSP00000360472.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7431	O95970	NM_005097.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542308.1	LGI1-201	2222	509aa	ENSP00000440763.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O95970	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371413.3	LGI1-002	1471	291aa	ENSP00000360467.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O95970	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478763.1	LGI1-003	592	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485458.1	LGI1-005	347	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464250.1	LGI1-004	265	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,290 bps, Translation length: 557 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95970

CCDS

This transcript is a member of the Human CCDS set: CCDS7431

Version

ENST00000371418.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000049445 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.