Transcript: ENST00000489783.1 SHOC2-004

Description

soc-2 suppressor of clear homolog (C. elegans) [Source:HGNC Symbol;Acc:15454]

Gene Synonyms

KIAA0862, SIAA0862, SOC-2, SOC2, SUR-8, SUR8

Location

About this transcript

This transcript has 2 exons, is associated with 19005 variant alleles and maps to 116 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369452.4	SHOC2-001	3943	582aa	ENSP00000358464.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7568	Q9UQ13	NM_007373.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000265277.5	SHOC2-201	3806	536aa	ENSP00000265277.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58095	Q9UQ13	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451838.1	SHOC2-002	2967	372aa	ENSP00000408275.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	NM_001269039.1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000489390.1	SHOC2-003	815	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489783.1	SHOC2-004	749	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480155.1	SHOC2-005	650	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497305.1	SHOC2-006	325	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 749 bps,

Version

ENST00000489783.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000050358 (version 1)