Transcript: ENST00000373585.3 DDX50-001

Description

DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 [Source:HGNC Symbol;Acc:17906]

Gene Synonyms

GU2, GUB, MGC3199, RH-II/GuB, mcdrh

Location

About this transcript

This transcript has 15 exons, is annotated with 19 domains and features, is associated with 20607 variant alleles and maps to 587 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373585.3	DDX50-001	2538	737aa	ENSP00000362687.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7283	B4DED6 Q9BQ39 Q9NTA9	NM_024045.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483593.1	DDX50-003	1067	39aa	ENSP00000474785.1	Nonsense mediated decay		S4R3V4	-	-
ENST00000471475.1	DDX50-002	888	51aa	ENSP00000474314.1	Nonsense mediated decay		S4R3G6	-	-
ENST00000466265.1	DDX50-005	744	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460470.1	DDX50-004	531	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,538 bps, Translation length: 737 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BQ39

CCDS

This transcript is a member of the Human CCDS set: CCDS7283

Version

ENST00000373585.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000048363 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.