Transcript: ENST00000392800.2 GALNTL5-001

Description

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5 [Source:HGNC Symbol;Acc:21725]

Gene Synonyms

GALNACT19, GALNT15

Location

About this transcript

This transcript has 9 exons, is annotated with 6 domains and features, is associated with 28495 variant alleles and maps to 447 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392800.2	GALNTL5-001	1719	443aa	ENSP00000376548.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5929	Q7Z4T8	NM_145292.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431418.2	GALNTL5-008	1678	443aa	ENSP00000392582.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5929	Q7Z4T8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416269.2	GALNTL5-004	2272	130aa	ENSP00000398570.2	Nonsense mediated decay		D3DX14	-	-
ENST00000414073.2	GALNTL5-006	2097	130aa	ENSP00000414260.2	Nonsense mediated decay		D3DX14	-	-
ENST00000426341.2	GALNTL5-003	1808	130aa	ENSP00000406595.2	Nonsense mediated decay		D3DX14	-	-
ENST00000448366.2	GALNTL5-005	1427	133aa	ENSP00000400106.2	Nonsense mediated decay		Q7Z4T8	-	-
ENST00000416062.1	GALNTL5-002	1344	133aa	ENSP00000411071.1	Nonsense mediated decay		Q7Z4T8	-	-
ENST00000483959.1	GALNTL5-010	771	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482845.2	GALNTL5-007	762	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468278.1	GALNTL5-009	474	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,719 bps, Translation length: 443 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7Z4T8

CCDS

This transcript is a member of the Human CCDS set: CCDS5929

Version

ENST00000392800.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000348395 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.