Transcript: ENST00000459642.1 GCK-005

Description

glucokinase (hexokinase 4) [Source:HGNC Symbol;Acc:4195]

Gene Synonyms

FGQTL3, GK, GLK, HHF3, HK4, HKIV, HXKP, LGLK, MODY2

Location

Chromosome 7: 44,183,872-44,185,728 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 1324 variant alleles and maps to 255 oligo probes.

Gene

This transcript is a product of gene ENSG00000106633.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000345378.2	GCK-002	2421	466aa	ENSP00000223366.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5480	M4PPE1 M4PS83 P35557	NM_033507.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000403799.3	GCK-001	2729	465aa	ENSP00000384247.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5479	M4PPE1 M4PS83 P35557 Q53Y25	NM_000162.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395796.3	GCK-003	2539	464aa	ENSP00000379142.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5481	M4PPE1 M4PS83 P35557	NM_033508.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437084.1	GCK-004	1385	448aa	ENSP00000402840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JQD1 M4PPE1 M4PS83	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000336642.4	GCK-006	1311	149aa	ENSP00000338009.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BXV0 M4PPE1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000476008.1	GCK-008	553	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473353.1	GCK-007	404	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000459642.1	GCK-005	1641	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,641 bps,

Version

ENST00000459642.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000343116 (version 1)

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Transcript: ENST00000459642.1 GCK-005

Summary