Transcript: ENST00000401412.1 AGR2-005

Description

anterior gradient 2 [Source:HGNC Symbol;Acc:328]

Gene Synonyms

AG2, GOB-4, HAG-2, HEL-S-116, PDIA17, XAG-2

Location

Chromosome 7: 16,834,298-16,844,611 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 5057 variant alleles and maps to 216 oligo probes.

Gene

This transcript is a product of gene ENSG00000106541.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000419304.2	AGR2-001	1778	175aa	ENSP00000391490.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5364	C9J3E2 O95994 Q4JM46	NM_006408.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419572.2	AGR2-201	854	195aa	ENSP00000388342.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J3E2 Q4JM46 Q4JM47	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401412.1	AGR2-005	782	188aa	ENSP00000386025.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MC07 C9J3E2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450569.1	AGR2-006	671	119aa	ENSP00000414806.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C3Z9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000412973.1	AGR2-007	670	131aa	ENSP00000411969.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J3E2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000486219.1	AGR2-003	117	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468419.1	AGR2-002	585	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489523.1	AGR2-004	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 782 bps, Translation length: 188 residues

Version

ENST00000401412.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000326384 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000401412.1 AGR2-005

Summary