Transcript: ENST00000223073.2 RBM28-001

Description

RNA binding motif protein 28 [Source:HGNC Symbol;Acc:21863]

Gene Synonyms

FLJ10377

Location

Chromosome 7: 127,937,738-127,983,962 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 30 domains and features, is associated with 19320 variant alleles and maps to 995 oligo probes.

Gene

This transcript is a product of gene ENSG00000106344.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000223073.2	RBM28-001	15507	759aa	ENSP00000223073.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5801	Q9NW13	NM_018077.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415472.2	RBM28-002	2251	618aa	ENSP00000390517.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55159	Q9NW13	NM_001166135.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478061.1	RBM28-005	932	283aa	ENSP00000418071.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JAA9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000459726.1	RBM28-003	728	204aa	ENSP00000420503.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JE21	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000487602.1	RBM28-006	715	186aa	ENSP00000419840.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000481788.1	RBM28-007	1052	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488249.1	RBM28-004	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495327.1	RBM28-008	395	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 15,507 bps, Translation length: 759 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NW13

CCDS

This transcript is a member of the Human CCDS set: CCDS5801

Version

ENST00000223073.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000349442 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000223073.2 RBM28-001

Summary