Transcript: ENST00000223061.5 PCOLCE-001

Description

procollagen C-endopeptidase enhancer [Source:HGNC Symbol;Acc:8738]

Gene Synonyms

PCPE, PCPE-1, PCPE1

Location

Chromosome 7: 100,199,800-100,205,798 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 19 domains and features, is associated with 3313 variant alleles and maps to 459 oligo probes.

Gene

This transcript is a product of gene ENSG00000106333.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000223061.5	PCOLCE-001	1702	449aa	ENSP00000223061.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5700	Q15113	NM_002593.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000496269.1	PCOLCE-002	995	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486440.1	PCOLCE-010	765	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472348.1	PCOLCE-003	960	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487172.1	PCOLCE-006	686	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462260.1	PCOLCE-004	554	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482863.1	PCOLCE-005	545	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468214.1	PCOLCE-007	541	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000460002.1	PCOLCE-008	447	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000490909.1	PCOLCE-009	318	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,702 bps, Translation length: 449 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15113

CCDS

This transcript is a member of the Human CCDS set: CCDS5700

Version

ENST00000223061.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000345285 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000223061.5 PCOLCE-001

Summary