Transcript: ENST00000343060.4 HOXA1-001

Description

homeobox A1 [Source:HGNC Symbol;Acc:5099]

Gene Synonyms

BSAS, HOX1, HOX1F

Location

About this transcript

This transcript has 2 exons, is annotated with 14 domains and features, is associated with 1705 variant alleles and maps to 382 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000343060.4	HOXA1-001	2517	335aa	ENSP00000343246.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5401	P49639	NM_005522.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355633.5	HOXA1-002	2016	137aa	ENSP00000347851.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5402	E7ERT8	NM_153620.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 2,517 bps, Translation length: 335 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P49639

CCDS

This transcript is a member of the Human CCDS set: CCDS5401

Version

ENST00000343060.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000358454 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.