Transcript: ENST00000543770.1 ATP1A3-007

Description

ATPase, Na+/K+ transporting, alpha 3 polypeptide [Source:HGNC Symbol;Acc:801]

Gene Synonyms

AHC2, DYT12, RDP

Location

Chromosome 19: 42,470,773-42,497,619 reverse strand.

About this transcript

This transcript has 23 exons, is annotated with 52 domains and features, is associated with 13505 variant alleles and maps to 649 oligo probes.

Gene

This transcript is a product of gene ENSG00000105409.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000545399.1	ATP1A3-008	3588	1026aa	ENSP00000444688.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58664	M0QXF2 M0R116 P13637 Q58I21	NM_001256214.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000302102.5	ATP1A3-001	3548	1013aa	ENSP00000302397.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12594	M0QXF2 M0R116 P13637 Q58I21	NM_152296.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543770.1	ATP1A3-007	3427	1024aa	ENSP00000437577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58663	M0QXF2 M0R116 P13637 Q58I21	NM_001256213.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602133.1	ATP1A3-005	3260	983aa	ENSP00000471581.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXF2 M0R116 Q58I21	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000473086.2	ATP1A3-011	669	178aa	ENSP00000469129.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXF2 Q58I21	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000441343.1	ATP1A3-002	3818	1226aa	ENSP00000411503.1	Non stop decay		M0QXF2 Q58I21	-	-
ENST00000468774.2	ATP1A3-006	530	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465007.1	ATP1A3-009	255	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485672.1	ATP1A3-003	963	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 3,427 bps, Translation length: 1,024 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P13637

CCDS

This transcript is a member of the Human CCDS set: CCDS58663

Version

ENST00000543770.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000268113 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000543770.1 ATP1A3-007

Summary