Transcript: ENST00000221930.5 TGFB1-001

Description

transforming growth factor, beta 1 [Source:HGNC Symbol;Acc:11766]

Gene Synonyms

CED, DPD1, LAP, TGFB, TGFbeta

Location

About this transcript

This transcript has 7 exons, is annotated with 25 domains and features, is associated with 11362 variant alleles and maps to 668 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000221930.5	TGFB1-001	2769	390aa	ENSP00000221930.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33031	P01137 Q5PY19 Q7Z487 Q7Z488	NM_000660.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000598758.1	TGFB1-004	559	120aa	ENSP00000472767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z487	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000600196.1	TGFB1-003	399	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000597453.1	TGFB1-002	392	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,769 bps, Translation length: 390 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P01137

CCDS

This transcript is a member of the Human CCDS set: CCDS33031

Version

ENST00000221930.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000463500 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.