Transcript: ENST00000452088.1 TLE6-001

Description

transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila) [Source:HGNC Symbol;Acc:30788]

Gene Synonyms

FLJ14009, GRG6

Location

Chromosome 19: 2,977,578-2,995,177 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 18 domains and features, is associated with 12191 variant alleles and maps to 476 oligo probes.

Gene

This transcript is a product of gene ENSG00000104953.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000246112.4	TLE6-002	2095	572aa	ENSP00000246112.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45910	C9J532 K7ENW8 Q9H808	NM_001143986.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452088.1	TLE6-001	1883	449aa	ENSP00000406893.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12100	Q9H808	NM_024760.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453329.1	TLE6-004	582	154aa	ENSP00000411783.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J532 K7ENW8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000482627.1	TLE6-005	456	45aa	ENSP00000467126.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENW8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478073.2	TLE6-010	1270	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468176.3	TLE6-008	785	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000591953.1	TLE6-011	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497878.1	TLE6-006	1559	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474207.2	TLE6-009	1188	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469572.1	TLE6-007	713	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 11, Transcript length: 1,883 bps, Translation length: 449 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H808

CCDS

This transcript is a member of the Human CCDS set: CCDS12100

Version

ENST00000452088.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000346332 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000452088.1 TLE6-001

Summary