Transcript: ENST00000323798.3 GYS1-001

Description

glycogen synthase 1 (muscle) [Source:HGNC Symbol;Acc:4706]

Gene Synonyms

GSY, GYS

Location

Chromosome 19: 49,471,382-49,496,566 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 9 domains and features, is associated with 13306 variant alleles and maps to 761 oligo probes.

Gene

This transcript is a product of gene ENSG00000104812.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000323798.3	GYS1-001	3574	737aa	ENSP00000317904.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12747	F5H1N8 P13807	NM_002103.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000263276.6	GYS1-006	3378	673aa	ENSP00000263276.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54292	F5H1N8 P13807	NM_001161587.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541188.1	GYS1-202	2561	657aa	ENSP00000437922.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z806 F5H1N8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544287.1	GYS1-203	1503	370aa	ENSP00000444004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H1N8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540532.1	GYS1-201	1276	235aa	ENSP00000445197.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H3S3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000594220.1	GYS1-007	427	113aa	ENSP00000470072.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000457974.1	GYS1-005	718	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472004.1	GYS1-002	578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000496048.1	GYS1-003	536	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484289.2	GYS1-004	459	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 3,574 bps, Translation length: 737 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P13807

CCDS

This transcript is a member of the Human CCDS set: CCDS12747

Version

ENST00000323798.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000319791 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000323798.3 GYS1-001

Summary