Transcript: ENST00000503731.1 TUSC3-007

Description

tumor suppressor candidate 3 [Source:HGNC Symbol;Acc:30242]

Gene Synonyms

D8S1992, M33, MGC13453, MRT22, MRT7, N33, OST3A

Location

Chromosome 8: 15,397,792-15,621,968 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 16 domains and features, is associated with 142104 variant alleles and maps to 583 oligo probes.

Gene

This transcript is a product of gene ENSG00000104723.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000382020.4	TUSC3-001	3683	347aa	ENSP00000371450.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5993	Q13454	NM_178234.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506802.1	TUSC3-004	1546	314aa	ENSP00000425777.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RIY7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503731.1	TUSC3-007	1498	348aa	ENSP00000424544.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5994	Q13454 Q6Q320	NM_006765.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509380.1	TUSC3-006	1266	289aa	ENSP00000423426.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RA37	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511783.2	TUSC3-008	1203	302aa	ENSP00000426880.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6Q320	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000515859.1	TUSC3-003	1627	276aa	ENSP00000420829.1	Nonsense mediated decay		D6RDV0	-	-
ENST00000510836.1	TUSC3-005	1452	276aa	ENSP00000426973.1	Nonsense mediated decay		D6RDV0	-	-
ENST00000503191.1	TUSC3-011	731	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507400.1	TUSC3-012	727	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508446.1	TUSC3-010	457	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507316.1	TUSC3-009	573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000511342.1	TUSC3-014	555	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509177.1	TUSC3-013	493	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,498 bps, Translation length: 348 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13454

CCDS

This transcript is a member of the Human CCDS set: CCDS5994

Version

ENST00000503731.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000365367 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000503731.1 TUSC3-007

Summary