Transcript: ENST00000520334.1 PPP2CB-004

Description

protein phosphatase 2, catalytic subunit, beta isozyme [Source:HGNC Symbol;Acc:9300]

Gene Synonyms

PP2Abeta, PP2CB

Location

Chromosome 8: 30,648,506-30,651,797 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 9 domains and features, is associated with 1528 variant alleles and maps to 105 oligo probes.

Gene

This transcript is a product of gene ENSG00000104695.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000221138.4	PPP2CB-001	2006	309aa	ENSP00000221138.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6079	E5RFI3 E5RJX4 P62714	NM_001009552.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520056.1	PPP2CB-010	755	125aa	ENSP00000428866.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFI3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518564.1	PPP2CB-002	691	47aa	ENSP00000428142.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJX4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520334.1	PPP2CB-004	578	124aa	ENSP00000430758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YC23	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000518243.1	PPP2CB-008	577	184aa	ENSP00000428618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHC1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000523023.1	PPP2CB-009	448	52aa	ENSP00000429927.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000520500.1	PPP2CB-007	603	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522113.1	PPP2CB-006	236	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000523804.1	PPP2CB-005	1262	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000518532.1	PPP2CB-003	566	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 578 bps, Translation length: 124 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000520334.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000376573 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000520334.1 PPP2CB-004

Summary