Transcript: ENST00000521323.1 IL7-003

Description

interleukin 7 [Source:HGNC Symbol;Acc:6023]

Gene Synonyms

IL-7

Location

Chromosome 8: 79,710,069-79,717,355 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 3166 variant alleles and maps to 125 oligo probes.

Gene

This transcript is a product of gene ENSG00000104432.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263851.4	IL7-001	2076	177aa	ENSP00000263851.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6224	D0EYG7 P13232 Q5FBY8	NM_001199887.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379113.2	IL7-201	817	71aa	ENSP00000368408.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5FBY3 Q5FBY8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520269.1	IL7-004	456	133aa	ENSP00000427750.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56541	P13232 Q5FBX5 Q5FBY8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541183.1	IL7-202	195	64aa	ENSP00000438922.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P13232	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518982.1	IL7-002	1940	71aa	ENSP00000430272.1	Nonsense mediated decay		Q5FBY3 Q5FBY8	-	-
ENST00000520317.1	IL7-006	1055	37aa	ENSP00000427800.1	Nonsense mediated decay		Q5FBY6 Q5FBY8	-	-
ENST00000520215.1	IL7-005	400	37aa	ENSP00000428364.1	Nonsense mediated decay		Q5FBY6 Q5FBY8	-	-
ENST00000519833.1	IL7-008	721	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000523959.1	IL7-007	635	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000521323.1	IL7-003	583	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 583 bps,

Version

ENST00000521323.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000379434 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000521323.1 IL7-003

Summary