Transcript: ENST00000520596.2 TRPA1-007

Description

transient receptor potential cation channel, subfamily A, member 1 [Source:HGNC Symbol;Acc:497]

Gene Synonyms

ANKTM1, FEPS

Location

About this transcript

This transcript has 2 exons, is associated with 297 variant alleles and maps to 137 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262209.4	TRPA1-001	5223	1119aa	ENSP00000262209.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34908	O75762	NM_007332.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523582.1	TRPA1-002	2812	916aa	ENSP00000428151.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YAW0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000519720.1	TRPA1-006	719	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000520596.2	TRPA1-007	484	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000520788.1	TRPA1-004	583	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522271.1	TRPA1-005	366	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 484 bps,

Version

ENST00000520596.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000379106 (version 2)