Transcript: ENST00000285379.5 CA2-001

Description

carbonic anhydrase II [Source:HGNC Symbol;Acc:1373]

Gene Synonyms

CA-II, CAC, CAII, Car2, HEL-76

Location

About this transcript

This transcript has 7 exons, is annotated with 8 domains and features, is associated with 7967 variant alleles and maps to 428 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000285379.5	CA2-001	1717	260aa	ENSP00000285379.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6239	P00918	NM_000067.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520127.1	CA2-002	875	97aa	ENSP00000428443.1	Nonsense mediated decay		E5RID5	-	-
ENST00000522742.1	CA2-005	691	101aa	ENSP00000428947.1	Nonsense mediated decay		E5RK37	-	-
ENST00000520996.1	CA2-003	684	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000518231.1	CA2-004	587	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,717 bps, Translation length: 260 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P00918

CCDS

This transcript is a member of the Human CCDS set: CCDS6239

Version

ENST00000285379.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000381097 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.