Transcript: ENST00000558395.1 MYEF2-009

Description

myelin expression factor 2 [Source:HGNC Symbol;Acc:17940]

Gene Synonyms

FLJ11213, HsT18564, KIAA1341, MEF-2, MST156, MSTP156

Location

Chromosome 15: 48,435,258-48,451,867 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 14 domains and features, is associated with 6561 variant alleles and maps to 324 oligo probes.

Gene

This transcript is a product of gene ENSG00000104177.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000324324.7	MYEF2-001	5563	600aa	ENSP00000316950.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32230	Q9P2K5	NM_016132.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000267836.6	MYEF2-003	2958	576aa	ENSP00000267836.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9P2K5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558395.1	MYEF2-009	868	290aa	ENSP00000453830.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000560172.1	MYEF2-012	731	126aa	ENSP00000452918.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000561351.1	MYEF2-002	2598	128aa	ENSP00000453125.1	Nonsense mediated decay		Q9P2K5	-	-
ENST00000561151.1	MYEF2-006	736	128aa	ENSP00000452913.1	Nonsense mediated decay		Q9P2K5	-	-
ENST00000557868.1	MYEF2-014	1029	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559862.1	MYEF2-007	633	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560157.1	MYEF2-008	576	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558289.1	MYEF2-005	4516	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560530.1	MYEF2-004	2037	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559057.1	MYEF2-013	688	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560513.1	MYEF2-011	679	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000561301.1	MYEF2-010	537	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 868 bps, Translation length: 290 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000558395.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000416982 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000558395.1 MYEF2-009

Summary