Transcript: ENST00000220496.4 DNAJC17-001

Description

DnaJ (Hsp40) homolog, subfamily C, member 17 [Source:HGNC Symbol;Acc:25556]

Gene Synonyms

FLJ10634

Location

Chromosome 15: 41,060,067-41,099,675 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 18 domains and features, is associated with 17616 variant alleles and maps to 365 oligo probes.

Gene

This transcript is a product of gene ENSG00000104129.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000220496.4	DNAJC17-001	1017	304aa	ENSP00000220496.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10065	Q9NVM6	NM_018163.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559238.1	DNAJC17-005	1341	102aa	ENSP00000453354.1	Nonsense mediated decay		H0YLV4	-	-
ENST00000560645.1	DNAJC17-004	903	143aa	ENSP00000452716.1	Nonsense mediated decay		H0YK99	-	-
ENST00000561018.1	DNAJC17-003	880	131aa	ENSP00000453298.1	Nonsense mediated decay		H0YLQ7	-	-
ENST00000559310.1	DNAJC17-006	792	131aa	ENSP00000454082.1	Nonsense mediated decay		H0YLQ7	-	-
ENST00000560065.2	DNAJC17-011	704	125aa	ENSP00000473912.1	Nonsense mediated decay		S4R343	-	-
ENST00000558727.1	DNAJC17-010	507	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000561044.1	DNAJC17-007	456	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560301.1	DNAJC17-002	987	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000561110.1	DNAJC17-009	529	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558769.1	DNAJC17-008	462	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,017 bps, Translation length: 304 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NVM6

CCDS

This transcript is a member of the Human CCDS set: CCDS10065

Version

ENST00000220496.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000252356 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000220496.4 DNAJC17-001

Summary