Transcript: ENST00000220420.5 TGM5-001

Description

transglutaminase 5 [Source:HGNC Symbol;Acc:11781]

Gene Synonyms

TGASE5, TGASEX, TGM6, TGMX, TGX

Location

About this transcript

This transcript has 13 exons, is annotated with 17 domains and features, is associated with 14442 variant alleles and maps to 458 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000220420.5	TGM5-001	2767	720aa	ENSP00000220420.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32212	O43548	NM_201631.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000349114.4	TGM5-002	1958	638aa	ENSP00000220419.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32211	O43548	NM_004245.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396996.3	TGM5-003	1653	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000563838.1	TGM5-004	448	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,767 bps, Translation length: 720 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43548

CCDS

This transcript is a member of the Human CCDS set: CCDS32212

Version

ENST00000220420.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000432257 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.