Transcript: ENST00000261884.3 TRIP4-001

Description

thyroid hormone receptor interactor 4 [Source:HGNC Symbol;Acc:12310]

Gene Synonyms

ASC-1, ASC1, HsT17391

Location

Chromosome 15: 64,680,003-64,747,502 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 10 domains and features, is associated with 30206 variant alleles and maps to 469 oligo probes.

Gene

This transcript is a product of gene ENSG00000103671.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261884.3	TRIP4-001	2045	581aa	ENSP00000261884.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10194	Q15650	NM_016213.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558162.1	TRIP4-004	558	111aa	ENSP00000452764.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000560475.1	TRIP4-012	521	61aa	ENSP00000454558.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000560567.1	TRIP4-002	1536	368aa	ENSP00000453106.1	Nonsense mediated decay		H0YL91	-	-
ENST00000558820.1	TRIP4-007	847	43aa	ENSP00000452675.1	Nonsense mediated decay		H0YK63	-	-
ENST00000560920.2	TRIP4-010	565	126aa	ENSP00000453276.2	Nonsense mediated decay		H0YLN7	-	-
ENST00000559565.1	TRIP4-008	761	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559833.1	TRIP4-005	636	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000557834.1	TRIP4-009	586	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559777.1	TRIP4-003	425	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558442.1	TRIP4-006	362	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000561265.1	TRIP4-011	1039	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,045 bps, Translation length: 581 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15650

CCDS

This transcript is a member of the Human CCDS set: CCDS10194

Version

ENST00000261884.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000256635 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000261884.3 TRIP4-001

Summary