Transcript: ENST00000262428.4 COTL1-001

Description

coactosin-like 1 (Dictyostelium) [Source:HGNC Symbol;Acc:18304]

Gene Synonyms

CLP

Location

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 29053 variant alleles and maps to 333 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262428.4	COTL1-001	1843	142aa	ENSP00000262428.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10947	H3BT58 Q14019	NM_021149.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564057.1	COTL1-002	1677	73aa	ENSP00000457033.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BT58	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000567278.1	COTL1-003	5330	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000567786.1	COTL1-007	511	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000561707.1	COTL1-006	781	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000564662.1	COTL1-005	713	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,843 bps, Translation length: 142 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14019

CCDS

This transcript is a member of the Human CCDS set: CCDS10947

Version

ENST00000262428.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000269075 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.