Transcript: ENST00000377453.3 CLN5-001

Description

ceroid-lipofuscinosis, neuronal 5 [Source:HGNC Symbol;Acc:2076]

Gene Synonyms

NCL

Location

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 5259 variant alleles and maps to 665 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377453.3	CLN5-001	4064	407aa	ENSP00000366673.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9456	B4E1V6 O75503	NM_006493.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000485938.1	CLN5-002	705	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 4,064 bps, Translation length: 407 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75503

CCDS

This transcript is a member of the Human CCDS set: CCDS9456

Version

ENST00000377453.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000045318 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.