Transcript: ENST00000379404.1 SMS-002

Description

spermine synthase [Source:HGNC Symbol;Acc:11123]

Gene Synonyms

MRSR, SPMSY, SRS, SpS

Location

About this transcript

This transcript has 9 exons, is annotated with 10 domains and features, is associated with 19507 variant alleles and maps to 400 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000404933.2	SMS-003	1837	366aa	ENSP00000385746.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14203	P52788	NM_004595.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415881.2	SMS-201	1592	275aa	ENSP00000388906.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DE40	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379404.1	SMS-002	1174	313aa	ENSP00000368714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59161	P52788	NM_001258423.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457085.1	SMS-004	931	311aa	ENSP00000407366.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000478094.1	SMS-001	488	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,174 bps, Translation length: 313 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P52788

CCDS

This transcript is a member of the Human CCDS set: CCDS59161

Version

ENST00000379404.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000056031 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.