Transcript: ENST00000486943.1 CACNA1F-005

Description

calcium channel, voltage-dependent, L type, alpha 1F subunit [Source:HGNC Symbol;Acc:1393]

Gene Synonyms

AIED, CACNAF1, COD3, COD4, CORDX, CORDX3, CSNB2, CSNB2A, CSNBX2, Cav1.4, Cav1.4alpha1, JM8, JMC8, OA2

Location

Chromosome X: 49,065,276-49,066,172 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 3 domains and features, is associated with 343 variant alleles and maps to 86 oligo probes.

Gene

This transcript is a product of gene ENSG00000102001.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000376265.2	CACNA1F-007	6070	1977aa	ENSP00000365441.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35253	O60840	NM_005183.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000323022.5	CACNA1F-001	6037	1966aa	ENSP00000321618.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59167	F5CIQ9 O60840	NM_001256789.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376251.1	CACNA1F-002	5813	1912aa	ENSP00000365427.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59166	O60840	NM_001256790.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000486943.1	CACNA1F-005	662	116aa	ENSP00000418961.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C549	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000480889.1	CACNA1F-006	505	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481035.1	CACNA1F-004	714	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 662 bps, Translation length: 116 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000486943.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000081208 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000486943.1 CACNA1F-005

Summary