Transcript: ENST00000398409.1 CST3-003

Description

cystatin C [Source:HGNC Symbol;Acc:2475]

Gene Synonyms

ARMD11

Location

About this transcript

This transcript has 4 exons, is annotated with 10 domains and features, is associated with 2855 variant alleles and maps to 277 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000398411.1	CST3-002	2095	146aa	ENSP00000381448.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13158	E9RH26 P01034	NM_001288614.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376925.3	CST3-001	873	146aa	ENSP00000366124.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13158	E9RH26 P01034	NM_000099.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398409.1	CST3-003	832	146aa	ENSP00000381446.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13158	E9RH26 P01034	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 832 bps, Translation length: 146 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P01034

CCDS

This transcript is a member of the Human CCDS set: CCDS13158

Version

ENST00000398409.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000256832 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.