Transcript: ENST00000217289.4 FERMT1-001

Description

fermitin family member 1 [Source:HGNC Symbol;Acc:15889]

Gene Synonyms

C20orf42, DTGCU2, FLJ20116, KIND1, UNC112A, URP1

Location

About this transcript

This transcript has 15 exons, is annotated with 18 domains and features, is associated with 20734 variant alleles and maps to 736 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000217289.4	FERMT1-001	5151	677aa	ENSP00000217289.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13098	G3V1L6 Q5JWV4 Q9BQL6	NM_017671.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536936.1	FERMT1-201	3229	420aa	ENSP00000441063.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V1L6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378844.1	FERMT1-004	567	146aa	ENSP00000368121.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JWV4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000478194.1	FERMT1-002	3322	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 5,151 bps, Translation length: 677 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BQL6

CCDS

This transcript is a member of the Human CCDS set: CCDS13098

Version

ENST00000217289.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000077908 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.