Transcript: ENST00000376542.3 ABHD12-002

Description

abhydrolase domain containing 12 [Source:HGNC Symbol;Acc:15868]

Gene Synonyms

ABHD12A, BEM46L2, C20orf22, DKFZP434P106, PHARC, dJ965G21.2

Location

Chromosome 20: 25,275,379-25,371,619 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 10 domains and features, is associated with 45821 variant alleles and maps to 521 oligo probes.

Gene

This transcript is a product of gene ENSG00000100997.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000339157.5	ABHD12-001	2117	398aa	ENSP00000341408.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42857	I3L294 I3L440 Q8N2K0	NM_001042472.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376542.3	ABHD12-002	1725	404aa	ENSP00000365725.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13172	I3L294 I3L440 Q8N2K0	NM_015600.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000491682.1	ABHD12-006	814	159aa	ENSP00000459495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L294 I3L440	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000471287.1	ABHD12-008	805	105aa	ENSP00000460950.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L440	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000576316.1	ABHD12-010	620	194aa	ENSP00000459121.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L1V0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000450393.1	ABHD12-005	615	187aa	ENSP00000413311.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T712	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000461204.1	ABHD12-004	712	118aa	ENSP00000460249.1	Nonsense mediated decay		I3L380	-	-
ENST00000465694.1	ABHD12-003	474	13aa	ENSP00000459278.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000481556.1	ABHD12-007	604	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,725 bps, Translation length: 404 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N2K0

CCDS

This transcript is a member of the Human CCDS set: CCDS13172

Version

ENST00000376542.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000078424 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000376542.3 ABHD12-002

Summary