Transcript: ENST00000311457.3 REC8-001

Description

REC8 meiotic recombination protein [Source:HGNC Symbol;Acc:16879]

Gene Synonyms

HR21spB, REC8L1, Rec8p, kleisin-alpha

Location

Chromosome 14: 24,641,062-24,649,463 forward strand.

About this transcript

This transcript has 20 exons, is annotated with 12 domains and features, is associated with 4625 variant alleles and maps to 601 oligo probes.

Gene

This transcript is a product of gene ENSG00000100918.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000311457.3	REC8-001	2402	546aa	ENSP00000308699.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41932	H0YLK4 H0YM87 H0YMV7 O95072	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559919.1	REC8-002	2328	546aa	ENSP00000453242.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41932	H0YLK4 H0YM87 H0YMV7	NM_005132.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560501.1	REC8-012	653	93aa	ENSP00000453506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YM87	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000557806.1	REC8-011	635	74aa	ENSP00000453763.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YMV7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000559797.1	REC8-007	1007	336aa	ENSP00000452701.1	Non stop decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000559939.1	REC8-013	494	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000557979.1	REC8-003	2717	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558782.1	REC8-010	1093	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558697.1	REC8-005	1032	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560032.1	REC8-004	661	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558191.1	REC8-008	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560823.1	REC8-009	424	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558381.1	REC8-006	405	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 2,402 bps, Translation length: 546 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95072

CCDS

This transcript is a member of the Human CCDS set: CCDS41932

Version

ENST00000311457.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000415889 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000311457.3 REC8-001

Summary