Transcript: ENST00000557389.1 NFKBIA-004

Description

nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha [Source:HGNC Symbol;Acc:7797]

Gene Synonyms

IKBA, IkappaBalpha, MAD-3, MAD3, NFKBI

Location

Chromosome 14: 35,870,751-35,873,346 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 16 domains and features, is associated with 2220 variant alleles and maps to 339 oligo probes.

Gene

This transcript is a product of gene ENSG00000100906.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216797.5	NFKBIA-001	1558	317aa	ENSP00000216797.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9656	G3V286 P25963 Q9UGJ5	NM_020529.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557389.1	NFKBIA-004	1537	227aa	ENSP00000450514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V286 Q9UGJ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557140.1	NFKBIA-002	1400	274aa	ENSP00000451257.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3I4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553342.1	NFKBIA-011	212	68aa	ENSP00000451281.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3K1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000554001.1	NFKBIA-003	1396	82aa	ENSP00000450537.1	Nonsense mediated decay		G3V2A2	-	-
ENST00000557100.1	NFKBIA-010	825	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000557459.1	NFKBIA-008	780	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555371.1	NFKBIA-006	690	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555629.1	NFKBIA-005	599	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556664.1	NFKBIA-007	381	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,537 bps, Translation length: 227 residues

Version

ENST00000557389.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000411492 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000557389.1 NFKBIA-004

Summary